BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D03SP1|AL429048
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1308 1741 0.0
>3x_Contig1308
Length = 5728
Score = 1741 bits (877), Expect = 0.0
Identities = 888/891 (99%), Gaps = 1/891 (0%)
Strand = Plus / Minus
Query: 1 attatcattgatatagctggtatgtgtatacgacttcaactatcgaaggttcgtgatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4846 attatcattgatatagctggtatgtgtatacgacttcaactatcgaaggttcgtgatatt 4787
Query: 61 ggaatacagaaaaaaaataaaaaagtgcgatacaaatttaattgaacgcatctaacaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4786 ggaatacagaaaaaaaataaaaaagtgcgatacaaatttaattgaacgcatctaacaatt 4727
Query: 121 gaattaaattatggttcaacgcgaaacaacgagtaggggaaagtaccggctaaaaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4726 gaattaaattatggttcaacgcgaaacaacgagtaggggaaagtaccggctaaaaaaatt 4667
Query: 181 acgtgccagtacatctactttccggcttcatgacaaaaaatatggaggtaacgaggccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4666 acgtgccagtacatctactttccggcttcatgacaaaaaatatggaggtaacgaggccca 4607
Query: 241 aacggtcaggtactgccaatgtggattataatctgaaaaagagacggattattccaagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4606 aacggtcaggtactgccaatgtggattataatctgaaaaagagacggattattccaagtg 4547
Query: 301 atgattatccaacgaaaagtacatcctcaatatcttcatcaccgtcccaagaaccatcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4546 atgattatccaacgaaaagtacatcctcaatatcttcatcaccgtcccaagaaccatcga 4487
Query: 361 cagaacctattggaccagtcattcttaaggatagtaatggaaatataacgtttcaggagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4486 cagaacctattggaccagtcattcttaaggatagtaatggaaatataacgtttcaggagc 4427
Query: 421 cgccagtgcatgatccaataaatgctatgacagggacgccattatctcagaagccgaa-g 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4426 cgccagtgcatgatccaataaatgctatgacagggacgccattatctcagaagccgaagg 4367
Query: 480 gatcgagtaacaacaacagtaacaataataatagtaccaataacatcaataataacgaca 539
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4366 gatcgagtaacaacaacagtaacaataataatagtaccaataacagcaataataacgaca 4307
Query: 540 atgatgatagcvataatagaagtggtaaacacagaaatggtaacaataagaagaagaaat 599
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4306 atgatgatagcaataatagaagtggtaaacacagaaatggtaacaataagaagaagaaat 4247
Query: 600 ccaatatattacaggcattaaagagcagcatggaggctaaatatgagggacaactacaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4246 ccaatatattacaggcattaaagagcagcatggaggctaaatatgagggacaactacaaa 4187
Query: 660 ctgaaaaatcaaatgaattgaccgtacaaagtcatgaacgcataggagcgaacactccca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4186 ctgaaaaatcaaatgaattgaccgtacaaagtcatgaacgcataggagcgaacactccca 4127
Query: 720 ctaaacacaacaaaaattcaggaattaaacaagaggctgactcggattttatgctacagg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4126 ctaaacacaacaaaaattcaggaattaaacaagaggctgactcggattttatgctacagg 4067
Query: 780 atcctatacgaaattcgcccagtaaatcgatagcactaaaaatggcgaaaaggttgaaat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4066 atcctatacgaaattcgcccagtaaatcgatagcactaaaaatggcgaaaaggttgaaat 4007
Query: 840 ctaccaaggataaagataccaagttatttggacaaaatgataaagcttctc 890
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4006 ctaccaaggataaagataccaagttatttggacaaaatgataaagcttctc 3956
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8619
Number of Sequences: 1807
Number of extensions: 8619
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)